Topics
The goal of the workshop is to guide the development of the Gaggle framework and software tools interconnected by the Gaggle and to explore opportunities for interoperability among systems biology software and databases.
Messaging Architectures
Data Management
- Bioinformatics Resource Manager (Bioinformatics Resource Manager)
- GWAP (My Gaggle)
- Peptide Atlas
- SBEAMS
- Systems Biology Markup Language
Research Applications
- Visualization of tiling array and ChIP-chip data
Visualization and analysis
- BioCyc
- BioTapestry
- CABIN
- CMonkey
- Cytoscape
- Human Proteome Folding
- Matlab
- MeV (MultiExperiment Viewer)
- PIPE
- The R project
- SeeGraph
- SEBINI
- Systems Biology Workbench
- T1DBase